pyriemann.classification.MeanField

class pyriemann.classification.MeanField(power_list=[-1, 0, 1], method_label='sum_means', metric='riemann', n_jobs=1)

Classification by Minimum Distance to Mean Field.

Classification by Minimum Distance to Mean Field [1], defining several power means for each class.

Parameters:
power_listlist of float, default=[-1,0,+1]

Exponents of power means.

method_label{‘sum_means’, ‘inf_means’}, default=’sum_means’

Method to combine labels:

  • sum_means: it assigns the covariance to the class whom the sum of distances to means of the field is the lowest;

  • inf_means: it assigns the covariance to the class of the closest mean of the field.

metricstring | dict, default=’riemann’

The type of metric used for distance estimation during prediction. See distance for the list of supported metric.

See also

MDM

Notes

New in version 0.3.

References

[1]

The Riemannian Minimum Distance to Means Field Classifier M Congedo, PLC Rodrigues, C Jutten. BCI 2019 - 8th International Brain-Computer Interface Conference, Sep 2019, Graz, Austria.

Attributes:
classes_ndarray, shape (n_classes,)

Labels for each class.

covmeans_dict of n_powers lists of n_classes ndarrays of shape (n_channels, n_channels)

Centroids for each power and each class.

__init__(power_list=[-1, 0, 1], method_label='sum_means', metric='riemann', n_jobs=1)

Init.

fit(X, y, sample_weight=None)

Fit (estimates) the centroids.

Parameters:
Xndarray, shape (n_matrices, n_channels, n_channels)

Set of SPD matrices.

yndarray, shape (n_matrices,)

Labels for each matrix.

sample_weightNone | ndarray shape (n_matrices,), default=None

Weights for each matrix. If None, it uses equal weights.

Returns:
selfMeanField instance

The MeanField instance.

fit_predict(X, y)

Fit and predict in one function.

fit_transform(X, y=None, **fit_params)

Fit to data, then transform it.

Fits transformer to X and y with optional parameters fit_params and returns a transformed version of X.

Parameters:
Xarray-like of shape (n_samples, n_features)

Input samples.

yarray-like of shape (n_samples,) or (n_samples, n_outputs), default=None

Target values (None for unsupervised transformations).

**fit_paramsdict

Additional fit parameters.

Returns:
X_newndarray array of shape (n_samples, n_features_new)

Transformed array.

get_metadata_routing()

Get metadata routing of this object.

Please check User Guide on how the routing mechanism works.

Returns:
routingMetadataRequest

A MetadataRequest encapsulating routing information.

get_params(deep=True)

Get parameters for this estimator.

Parameters:
deepbool, default=True

If True, will return the parameters for this estimator and contained subobjects that are estimators.

Returns:
paramsdict

Parameter names mapped to their values.

predict(X)

Get the predictions.

Parameters:
Xndarray, shape (n_matrices, n_channels, n_channels)

Set of SPD matrices.

Returns:
predndarray of int, shape (n_matrices,)

Predictions for each matrix according to the closest means field.

predict_proba(X)

Predict proba using softmax of negative squared distances.

Parameters:
Xndarray, shape (n_matrices, n_channels, n_channels)

Set of SPD matrices.

Returns:
probndarray, shape (n_matrices, n_classes)

Probabilities for each class.

score(X, y, sample_weight=None)

Return the mean accuracy on the given test data and labels.

In multi-label classification, this is the subset accuracy which is a harsh metric since you require for each sample that each label set be correctly predicted.

Parameters:
Xarray-like of shape (n_samples, n_features)

Test samples.

yarray-like of shape (n_samples,) or (n_samples, n_outputs)

True labels for X.

sample_weightarray-like of shape (n_samples,), default=None

Sample weights.

Returns:
scorefloat

Mean accuracy of self.predict(X) w.r.t. y.

set_fit_request(*, sample_weight: bool | None | str = '$UNCHANGED$') → MeanField

Request metadata passed to the fit method.

Note that this method is only relevant if enable_metadata_routing=True (see sklearn.set_config()). Please see User Guide on how the routing mechanism works.

The options for each parameter are:

  • True: metadata is requested, and passed to fit if provided. The request is ignored if metadata is not provided.

  • False: metadata is not requested and the meta-estimator will not pass it to fit.

  • None: metadata is not requested, and the meta-estimator will raise an error if the user provides it.

  • str: metadata should be passed to the meta-estimator with this given alias instead of the original name.

The default (sklearn.utils.metadata_routing.UNCHANGED) retains the existing request. This allows you to change the request for some parameters and not others.

New in version 1.3.

Note

This method is only relevant if this estimator is used as a sub-estimator of a meta-estimator, e.g. used inside a Pipeline. Otherwise it has no effect.

Parameters:
sample_weightstr, True, False, or None, default=sklearn.utils.metadata_routing.UNCHANGED

Metadata routing for sample_weight parameter in fit.

Returns:
selfobject

The updated object.

set_output(*, transform=None)

Set output container.

See sphx_glr_auto_examples_miscellaneous_plot_set_output.py for an example on how to use the API.

Parameters:
transform{“default”, “pandas”}, default=None

Configure output of transform and fit_transform.

  • “default”: Default output format of a transformer

  • “pandas”: DataFrame output

  • None: Transform configuration is unchanged

Returns:
selfestimator instance

Estimator instance.

set_params(**params)

Set the parameters of this estimator.

The method works on simple estimators as well as on nested objects (such as Pipeline). The latter have parameters of the form <component>__<parameter> so that it’s possible to update each component of a nested object.

Parameters:
**paramsdict

Estimator parameters.

Returns:
selfestimator instance

Estimator instance.

set_score_request(*, sample_weight: bool | None | str = '$UNCHANGED$') → MeanField

Request metadata passed to the score method.

Note that this method is only relevant if enable_metadata_routing=True (see sklearn.set_config()). Please see User Guide on how the routing mechanism works.

The options for each parameter are:

  • True: metadata is requested, and passed to score if provided. The request is ignored if metadata is not provided.

  • False: metadata is not requested and the meta-estimator will not pass it to score.

  • None: metadata is not requested, and the meta-estimator will raise an error if the user provides it.

  • str: metadata should be passed to the meta-estimator with this given alias instead of the original name.

The default (sklearn.utils.metadata_routing.UNCHANGED) retains the existing request. This allows you to change the request for some parameters and not others.

New in version 1.3.

Note

This method is only relevant if this estimator is used as a sub-estimator of a meta-estimator, e.g. used inside a Pipeline. Otherwise it has no effect.

Parameters:
sample_weightstr, True, False, or None, default=sklearn.utils.metadata_routing.UNCHANGED

Metadata routing for sample_weight parameter in score.

Returns:
selfobject

The updated object.

transform(X)

Get the distance to each means field.

Parameters:
Xndarray, shape (n_matrices, n_channels, n_channels)

Set of SPD matrices.

Returns:
distndarray, shape (n_matrices, n_classes)

Distance to each means field according to the metric.