pyriemann.regression.SVR

class pyriemann.regression.SVR(*, metric='riemann', kernel_fct=None, Cref=None, tol=0.001, C=1.0, epsilon=0.1, shrinking=True, cache_size=200, verbose=False, max_iter=-1)

Regression by support-vector machine.

Support-vector machine (SVM) regression with precomputed Riemannian kernel matrix according to different metrics, extending the idea described in [1] to regression.

Parameters:
metric{“euclid”, “logeuclid”, “riemann”}, default=”riemann”

Metric for kernel matrix computation.

CrefNone | ndarray, shape (n_channels, n_channels)

Reference point for kernel matrix computation. If None, the mean of the training data according to the metric is used.

kernel_fct‘precomputed’ | callable

If ‘precomputed’, the kernel matrix for datasets X and Y is estimated according to pyriemann.utils.kernel(X, Y, Cref, metric). If callable, the callable is passed as the kernel parameter to sklearn.svm.SVC() [2]. The callable has to be of the form kernel(X, Y, Cref, metric).

tolfloat, default=1e-3

Tolerance for stopping criterion.

Cfloat, default=1.0

Regularization parameter. The strength of the regularization is inversely proportional to C. Must be strictly positive. The penalty is a squared l2 penalty.

epsilonfloat, default=0.1

Epsilon in the epsilon-SVR model. It specifies the epsilon-tube within which no penalty is associated in the training loss function with points predicted within a distance epsilon from the actual value.

shrinkingbool, default=True

Whether to use the shrinking heuristic.

cache_sizefloat, default=200

Specify the size of the kernel cache (in MB).

verbosebool, default=False

Enable verbose output. Note that this setting takes advantage of a per-process runtime setting in libsvm that, if enabled, may not work properly in a multithreaded context.

max_iterint, default=-1

Hard limit on iterations within solver, or -1 for no limit.

Notes

New in version 0.3.

References

[1]

Classification of covariance matrices using a Riemannian-based kernel for BCI applications A. Barachant, S. Bonnet, M. Congedo and C. Jutten. Neurocomputing, Elsevier, 2013, 112, pp.172-178.

Attributes:
data_ndarray, shape (n_matrices, n_channels, n_channels)

If fitted, training data.

__init__(*, metric='riemann', kernel_fct=None, Cref=None, tol=0.001, C=1.0, epsilon=0.1, shrinking=True, cache_size=200, verbose=False, max_iter=-1)

Init.

property coef_

Weights assigned to the features when kernel=”linear”.

Returns:
ndarray of shape (n_features, n_classes)
fit(X, y, sample_weight=None)

Fit.

Parameters:
Xndarray, shape (n_matrices, n_channels, n_channels)

Set of SPD matrices.

yndarray, shape (n_matrices,)

Target values for each matrix.

sample_weightNone | ndarray, shape (n_matrices,), default=None

Weights for each matrix. Rescale C per matrix. Higher weights force the classifier to put more emphasis on these matrices. If None, it uses equal weights.

Returns:
selfSVR instance

The SVR instance.

get_metadata_routing()

Get metadata routing of this object.

Please check User Guide on how the routing mechanism works.

Returns:
routingMetadataRequest

A MetadataRequest encapsulating routing information.

get_params(deep=True)

Get parameters for this estimator.

Parameters:
deepbool, default=True

If True, will return the parameters for this estimator and contained subobjects that are estimators.

Returns:
paramsdict

Parameter names mapped to their values.

property n_support_

Number of support vectors for each class.

predict(X)

Perform regression on samples in X.

For an one-class model, +1 (inlier) or -1 (outlier) is returned.

Parameters:
X{array-like, sparse matrix} of shape (n_samples, n_features)

For kernel=”precomputed”, the expected shape of X is (n_samples_test, n_samples_train).

Returns:
y_predndarray of shape (n_samples,)

The predicted values.

score(X, y, sample_weight=None)

Return the coefficient of determination of the prediction.

The coefficient of determination \(R^2\) is defined as \((1 - \frac{u}{v})\), where \(u\) is the residual sum of squares ((y_true - y_pred)** 2).sum() and \(v\) is the total sum of squares ((y_true - y_true.mean()) ** 2).sum(). The best possible score is 1.0 and it can be negative (because the model can be arbitrarily worse). A constant model that always predicts the expected value of y, disregarding the input features, would get a \(R^2\) score of 0.0.

Parameters:
Xarray-like of shape (n_samples, n_features)

Test samples. For some estimators this may be a precomputed kernel matrix or a list of generic objects instead with shape (n_samples, n_samples_fitted), where n_samples_fitted is the number of samples used in the fitting for the estimator.

yarray-like of shape (n_samples,) or (n_samples, n_outputs)

True values for X.

sample_weightarray-like of shape (n_samples,), default=None

Sample weights.

Returns:
scorefloat

\(R^2\) of self.predict(X) w.r.t. y.

Notes

The \(R^2\) score used when calling score on a regressor uses multioutput='uniform_average' from version 0.23 to keep consistent with default value of r2_score(). This influences the score method of all the multioutput regressors (except for MultiOutputRegressor).

set_fit_request(*, sample_weight: bool | None | str = '$UNCHANGED$') → SVR

Request metadata passed to the fit method.

Note that this method is only relevant if enable_metadata_routing=True (see sklearn.set_config()). Please see User Guide on how the routing mechanism works.

The options for each parameter are:

  • True: metadata is requested, and passed to fit if provided. The request is ignored if metadata is not provided.

  • False: metadata is not requested and the meta-estimator will not pass it to fit.

  • None: metadata is not requested, and the meta-estimator will raise an error if the user provides it.

  • str: metadata should be passed to the meta-estimator with this given alias instead of the original name.

The default (sklearn.utils.metadata_routing.UNCHANGED) retains the existing request. This allows you to change the request for some parameters and not others.

New in version 1.3.

Note

This method is only relevant if this estimator is used as a sub-estimator of a meta-estimator, e.g. used inside a Pipeline. Otherwise it has no effect.

Parameters:
sample_weightstr, True, False, or None, default=sklearn.utils.metadata_routing.UNCHANGED

Metadata routing for sample_weight parameter in fit.

Returns:
selfobject

The updated object.

set_params(**params)

Set the parameters of this estimator.

The method works on simple estimators as well as on nested objects (such as Pipeline). The latter have parameters of the form <component>__<parameter> so that it’s possible to update each component of a nested object.

Parameters:
**paramsdict

Estimator parameters.

Returns:
selfestimator instance

Estimator instance.

set_score_request(*, sample_weight: bool | None | str = '$UNCHANGED$') → SVR

Request metadata passed to the score method.

Note that this method is only relevant if enable_metadata_routing=True (see sklearn.set_config()). Please see User Guide on how the routing mechanism works.

The options for each parameter are:

  • True: metadata is requested, and passed to score if provided. The request is ignored if metadata is not provided.

  • False: metadata is not requested and the meta-estimator will not pass it to score.

  • None: metadata is not requested, and the meta-estimator will raise an error if the user provides it.

  • str: metadata should be passed to the meta-estimator with this given alias instead of the original name.

The default (sklearn.utils.metadata_routing.UNCHANGED) retains the existing request. This allows you to change the request for some parameters and not others.

New in version 1.3.

Note

This method is only relevant if this estimator is used as a sub-estimator of a meta-estimator, e.g. used inside a Pipeline. Otherwise it has no effect.

Parameters:
sample_weightstr, True, False, or None, default=sklearn.utils.metadata_routing.UNCHANGED

Metadata routing for sample_weight parameter in score.

Returns:
selfobject

The updated object.